euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

167 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip2469 chr1 95801844 95801844 - unknown germline . no 240 .
srip2813 chr1 101978986 101978986 - unknown germline . no 240 .
srip3053 chr1 102568916 102568916 + unknown germline . no 240 .
srip3895 chr1 119553359 119553359 + unknown germline . no 240 .
srip4109 chr1 149308426 149308426 + unknown germline . no 240 LOC645262
srip4749 chr1 165553142 165553142 - unknown germline . no 240 .
srip5059 chr1 169524867 169524867 + unknown germline . no 240 F5
srip5553 chr1 183969678 183969678 - unknown germline . no 240 GLT25D2
srip5585 chr1 185331999 185331999 + unknown germline . no 240 .
srip6450 chr1 217548991 217548991 - unknown germline . no 240 .
srip6860 chr1 221827812 221827812 - unknown germline . no 240 .
srip7078 chr1 231007802 231007802 . unknown germline . no 240 .
srip7221 chr1 237449858 237449858 . unknown germline . no 240 RYR2
srip7469 chr1 249191467 249191467 + unknown germline . no 240 .
srip8446 chr10 25707688 25707688 - unknown germline . no 240 GPR158
srip8836 chr10 42797341 42797341 . unknown germline . no 240 .
srip8999 chr10 59508864 59508864 + unknown germline . no 240 .
srip9705 chr10 76230337 76230337 . unknown germline . no 240 ADK
srip9814 chr10 82972200 82972200 . unknown germline . no 240 .
srip9987 chr10 83982381 83982381 - unknown germline . no 240 NRG3
srip11826 chr10 124455224 124455224 + unknown germline . no 240 .
srip11917 chr10 127579100 127579100 . unknown germline . no 240 .
srip11918 chr10 127582771 127582771 - unknown germline . no 240 .
srip12551 chr11 15380252 15380252 + unknown germline . no 240 .
srip13824 chr11 33670130 33670130 + unknown germline . no 240 C11orf41
srip14249 chr11 41831803 41831803 - unknown germline . no 240 .
srip14729 chr11 48360744 48360744 - unknown germline . no 240 .
srip15370 chr11 58171843 58171843 + unknown germline . no 240 .
srip17188 chr11 94684368 94684368 + unknown germline . no 240 .
srip17660 chr11 104556129 104556129 - unknown germline . no 240 .
srip18131 chr11 111082407 111082407 . unknown germline . no 240 .
srip19268 chr11 134305645 134305645 - unknown germline . no 240 .
srip19904 chr12 11219195 11219195 - unknown germline . no 240 PRH1-PRR4
srip20121 chr12 12933687 12933687 - unknown germline . no 240 APOLD1
srip21748 chr12 38115156 38115156 + unknown germline . no 240 .
srip22216 chr12 43256979 43256979 - unknown germline . no 240 .
srip22855 chr12 49106384 49106384 . unknown germline . no 240 CCNT1
srip24405 chr12 84955208 84955208 - unknown germline . no 240 .
srip25648 chr12 117814453 117814453 - unknown germline . no 240 .
srip26374 chr12 126802936 126802936 - unknown germline . no 240 .
srip26898 chr13 22489798 22489798 + unknown germline . no 240 .
srip28001 chr13 42771396 42771396 + unknown germline . no 240 DGKH
srip29065 chr13 61462338 61462338 - unknown germline . no 240 .
srip29639 chr13 61734491 61734491 + unknown germline . no 240 .
srip29751 chr13 64569846 64569846 . unknown germline . no 240 .
srip30970 chr13 79259790 79259790 - unknown germline . no 240 .
srip31565 chr13 85871605 85871605 - unknown germline . no 240 .
srip32000 chr13 86340151 86340151 - unknown germline . no 240 .
srip33542 chr13 104296230 104296230 - unknown germline . no 240 .
srip35217 chr14 28301256 28301256 + unknown germline . no 240 .
srip35869 chr14 36674752 36674752 + unknown germline . no 240 .
srip36586 chr14 42543544 42543544 . unknown germline . no 240 .
srip37344 chr14 59220394 59220394 + unknown germline . no 240 .
srip40239 chr15 47507335 47507335 - unknown germline . no 240 SEMA6D
srip42258 chr15 77910870 77910870 . unknown germline . no 240 LINGO1
srip42529 chr15 83551628 83551628 - unknown germline . no 240 HOMER2
srip42604 chr15 85140899 85140899 + unknown germline . no 240 .
srip43257 chr15 100931152 100931152 - unknown germline . no 240 .
srip43423 chr15 101753511 101753511 . unknown germline . no 240 CHSY1
srip45509 chr16 33992437 33992437 . unknown germline . no 240 .
srip46317 chr16 71028016 71028016 + unknown germline . no 240 HYDIN
srip46540 chr17 6341639 6341639 - unknown germline . no 240 .
srip47211 chr17 28398310 28398310 + unknown germline . no 240 EFCAB5
srip47700 chr17 32813627 32813627 + unknown germline . no 240 .
srip47891 chr17 34272157 34272157 + unknown germline . no 240 .
srip48363 chr17 68357404 68357404 + unknown germline . no 240 .
srip48881 chr18 12491257 12491257 + unknown germline . no 240 SPIRE1
srip48961 chr18 15095253 15095253 - unknown germline . no 240 .
srip50019 chr18 49216225 49216225 - unknown germline . no 240 .
srip50192 chr18 50097749 50097749 - unknown germline . no 240 DCC
srip50363 chr18 51425734 51425734 - unknown germline . no 240 .
srip52433 chr19 45444694 45444694 + unknown germline . no 240 .
srip53476 chr2 23191008 23191008 - unknown germline . no 240 .
srip54275 chr2 36570260 36570260 - unknown germline . no 240 .
srip56555 chr2 87407701 87407701 + unknown germline . no 240 .
srip56602 chr2 92276204 92276204 . unknown germline . no 240 .
srip56870 chr2 106163161 106163161 + unknown germline . no 240 .
srip58236 chr2 141852915 141852915 - unknown germline . no 240 LRP1B
srip58568 chr2 144010786 144010786 + unknown germline . no 240 ARHGAP15
srip59197 chr2 147020925 147020925 + unknown germline . no 240 .
srip61782 chr2 217089941 217089941 . unknown germline . no 240 .
srip62633 chr2 235519802 235519802 + unknown germline . no 240 .
srip63469 chr20 16479499 16479499 - unknown germline . no 240 KIF16B
srip64023 chr20 25895497 25895497 - unknown germline . no 240 .
srip64066 chr20 25903875 25903875 - unknown germline . no 240 .
srip64161 chr20 29638117 29638117 . unknown germline . no 240 .
srip64510 chr20 29809086 29809086 . unknown germline . no 240 .
srip64781 chr20 41952105 41952105 - unknown germline . no 240 .
srip65418 chr21 10778263 10778263 . unknown germline . no 240 .
srip65423 chr21 10806190 10806190 . unknown germline . no 240 .
srip65431 chr21 11111752 11111752 . unknown germline . no 240 .
srip66930 chr21 29069178 29069178 . unknown germline . no 240 .
srip67454 chr22 22486370 22486370 - unknown germline . no 240 IGL@
srip67844 chr22 22715595 22715595 + unknown germline . no 240 IGL@
srip68743 chr22 44324597 44324597 - unknown germline . no 240 PNPLA3
srip70729 chr3 24987866 24987866 - unknown germline . no 240 .
srip71073 chr3 26524455 26524455 - unknown germline . no 240 .
srip71909 chr3 38626071 38626071 + unknown germline . no 240 SCN5A
srip73380 chr3 59852896 59852896 + unknown germline . no 240 FHIT
srip73768 chr3 75101216 75101216 + unknown germline . no 240 .
srip79877 chr3 169269958 169269958 + unknown germline . no 240 MECOM
srip80849 chr3 181192836 181192836 + unknown germline . no 240 .
srip82120 chr3 193354172 193354172 - unknown germline . no 240 OPA1
srip82289 chr4 5667994 5667994 - unknown germline . no 240 EVC2
srip82998 chr4 18162684 18162684 - unknown germline . no 240 .
srip83847 chr4 29321856 29321856 + unknown germline . no 240 .
srip84716 chr4 47007787 47007787 - unknown germline . no 240 .
srip85930 chr4 59622445 59622445 + unknown germline . no 240 .
srip86178 chr4 66413931 66413931 + unknown germline . no 240 EPHA5
srip90351 chr4 115132699 115132699 + unknown germline . no 240 .
srip93737 chr4 157447968 157447968 + unknown germline . no 240 .
srip94052 chr4 165231736 165231736 - unknown germline . no 240 MARCH1
srip95386 chr4 190659701 190659701 + unknown germline . no 240 .
srip96078 chr5 8749521 8749521 + unknown germline . no 240 .
srip96893 chr5 21207723 21207723 + unknown germline . no 240 .
srip97013 chr5 23339375 23339375 - unknown germline . no 240 .
srip97747 chr5 33633341 33633341 - unknown germline . no 240 ADAMTS12
srip98363 chr5 41602035 41602035 + unknown germline . no 240 .
srip99517 chr5 68263468 68263468 - unknown germline . no 240 .
srip100734 chr5 89450775 89450775 + unknown germline . no 240 .
srip102874 chr5 121119301 121119301 + unknown germline . no 240 .
srip105253 chr5 155619871 155619871 + unknown germline . no 240 .
srip105733 chr5 160435672 160435672 - unknown germline . no 240 .
srip106597 chr6 2135786 2135786 - unknown germline . no 240 GMDS
srip106658 chr6 5558280 5558280 + unknown germline . no 240 FARS2
srip107071 chr6 13191028 13191028 + unknown germline . no 240 PHACTR1
srip107520 chr6 13503042 13503042 + unknown germline . no 240 .
srip108289 chr6 45852704 45852704 - unknown germline . no 240 .
srip109131 chr6 57494221 57494221 - unknown germline . no 240 PRIM2
srip109536 chr6 63368201 63368201 + unknown germline . no 240 .
srip112052 chr6 91669514 91669514 - unknown germline . no 240 .
srip112718 chr6 102283765 102283765 - unknown germline . no 240 GRIK2
srip113817 chr6 142450105 142450105 - unknown germline . no 240 .
srip114754 chr6 148195798 148195798 + unknown germline . no 240 .
srip115694 chr6 162181262 162181262 + unknown germline . no 240 PARK2
srip116206 chr7 10500040 10500040 . unknown germline . no 240 .
srip117467 chr7 52789459 52789459 + unknown germline . no 240 .
srip117900 chr7 57768878 57768878 - unknown germline . no 240 LOC100287663
srip118512 chr7 66591179 66591179 - unknown germline . no 240 TYW1
srip120242 chr7 85044744 85044744 + unknown germline . no 240 .
srip121732 chr7 107829256 107829256 + unknown germline . no 240 NRCAM
srip122022 chr7 108325670 108325670 + unknown germline . no 240 .
srip122427 chr7 112789617 112789617 . unknown germline . no 240 .
srip124087 chr8 4452902 4452902 - unknown germline . no 240 CSMD1
srip124381 chr8 5829282 5829282 - unknown germline . no 240 .
srip125776 chr8 40433179 40433179 - unknown germline . no 240 ZMAT4
srip127474 chr8 74587622 74587622 + unknown germline . no 240 STAU2
srip127581 chr8 75723729 75723729 + unknown germline . no 240 .
srip128286 chr8 87315042 87315042 + unknown germline . no 240 .
srip129125 chr8 115788562 115788562 - unknown germline . no 240 .
srip131093 chr9 6290487 6290487 + unknown germline . no 240 .
srip131371 chr9 7741401 7741401 + unknown germline . no 240 .
srip131389 chr9 8344967 8344967 + unknown germline . no 240 PTPRD
srip131736 chr9 19671056 19671056 . unknown germline . no 240 SLC24A2
srip133413 chr9 32463891 32463891 - unknown germline . no 240 DDX58
srip133631 chr9 34904794 34904794 - unknown germline . no 240 .
srip134706 chr9 100675542 100675542 - unknown germline . no 240 C9orf156
srip135880 chr9 118083873 118083873 - unknown germline . no 240 DEC1
srip137241 chrX 54917144 54917144 + unknown germline . no 240 .
srip137346 chrX 55264659 55264659 - unknown germline . no 240 .
srip137569 chrX 55585154 55585154 - unknown germline . no 240 .
srip137791 chrX 61799456 61799456 + unknown germline . no 240 .
srip138344 chrX 66982758 66982758 - unknown germline . no 240 .
srip140095 chrX 102363189 102363189 + unknown germline . no 240 .
srip140455 chrX 111557754 111557754 - unknown germline . no 240 ZCCHC16
srip141073 chrX 122664864 122664864 - unknown germline . no 240 .
srip142277 chrY 13490336 13490336 + unknown germline . no 240 .